Dies ist eine Übersichtsseite mit Metadaten zu dieser wissenschaftlichen Arbeit. Der vollständige Artikel ist beim Verlag verfügbar.
<scp>HER</scp>2 challenge contest: a detailed assessment of automated <scp>HER</scp>2 scoring algorithms in whole slide images of breast cancer tissues
156
Zitationen
22
Autoren
2017
Jahr
Abstract
AIMS: Evaluating expression of the human epidermal growth factor receptor 2 (HER2) by visual examination of immunohistochemistry (IHC) on invasive breast cancer (BCa) is a key part of the diagnostic assessment of BCa due to its recognized importance as a predictive and prognostic marker in clinical practice. However, visual scoring of HER2 is subjective, and consequently prone to interobserver variability. Given the prognostic and therapeutic implications of HER2 scoring, a more objective method is required. In this paper, we report on a recent automated HER2 scoring contest, held in conjunction with the annual PathSoc meeting held in Nottingham in June 2016, aimed at systematically comparing and advancing the state-of-the-art artificial intelligence (AI)-based automated methods for HER2 scoring. METHODS AND RESULTS: The contest data set comprised digitized whole slide images (WSI) of sections from 86 cases of invasive breast carcinoma stained with both haematoxylin and eosin (H&E) and IHC for HER2. The contesting algorithms predicted scores of the IHC slides automatically for an unseen subset of the data set and the predicted scores were compared with the 'ground truth' (a consensus score from at least two experts). We also report on a simple 'Man versus Machine' contest for the scoring of HER2 and show that the automated methods could beat the pathology experts on this contest data set. CONCLUSIONS: This paper presents a benchmark for comparing the performance of automated algorithms for scoring of HER2. It also demonstrates the enormous potential of automated algorithms in assisting the pathologist with objective IHC scoring.
Ähnliche Arbeiten
A survey on deep learning in medical image analysis
2017 · 14.008 Zit.
pROC: an open-source package for R and S+ to analyze and compare ROC curves
2011 · 13.802 Zit.
Dermatologist-level classification of skin cancer with deep neural networks
2017 · 13.525 Zit.
A survey on Image Data Augmentation for Deep Learning
2019 · 12.145 Zit.
QuPath: Open source software for digital pathology image analysis
2017 · 8.432 Zit.
Autoren
- Talha Qaiser
- Abhik Mukherjee
- Chaitanya Reddy PB
- Sai Dileep Munugoti
- T. Vamsi
- Tomi Pitkäaho
- Taina Lehtimäki
- Thomas J. Naughton
- Matt Berseth
- Aníbal Pedraza
- Ramakrishnan Mukundan
- Matthew Smith
- Abhir Bhalerao
- Erik Rodner
- Marcel Simon
- Joachim Denzler
- Zhaohui Huang
- Gloria Bueno
- David Snead
- Ian O. Ellis
- Mohammad Ilyas
- Nasir Rajpoot
Institutionen
- University of Warwick(GB)
- University of Nottingham(GB)
- Indian Institute of Technology Guwahati(IN)
- National University of Ireland, Maynooth(IE)
- Coherent Logix (United States)(US)
- University of Castilla-La Mancha(ES)
- University of Canterbury(NZ)
- Friedrich Schiller University Jena(DE)
- Agency for Science, Technology and Research(SG)
- Mondelēz International (Singapore)(SG)
- University Hospital Coventry(GB)
- University Hospitals Coventry and Warwickshire NHS Trust(GB)